Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase mltc | EPS91_12050 | Not Available | Positive | 2557929 - 2559008 | 40112.8 |
| nucleoside permease | EPS91_12055 | Not Available | Positive | 2559210 - 2560466 | 46392.0 |
| ornithine decarboxylase | EPS91_12060 | Not Available | Negative | 2560512 - 2562647 | 79474.7 |
| duf554 domain-containing protein | EPS91_12065 | Not Available | Positive | 2563046 - 2563744 | 24309.1 |
| Trna-phe | Not Available | Not Available | Positive | 2563850 - 2563925 | Not Available |
| site-specific integrase | EPS91_12075 | Not Available | Negative | 2564131 - 2565228 | 42582.0 |
| helicase | EPS91_12080 | Not Available | Negative | 2565267 - 2566772 | 54242.0 |
| atp-dependent helicase | EPS91_12085 | Not Available | Negative | 2566765 - 2568273 | 57198.5 |
| duf1187 family protein | EPS91_12090 | Not Available | Positive | 2568811 - 2569041 | 8374.98 |
| hypothetical protein | EPS91_12095 | Not Available | Positive | 2569050 - 2569490 | 16696.4 |
Pathways
956 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





