Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | EPS91_11995 | Not Available | Positive | 2549048 - 2550253 | 44473.6 |
| putative sulfurtransferase yedf | EPS91_12000 | Not Available | Positive | 2550250 - 2550483 | 8639.5 |
| sos response-associated peptidase | EPS91_12005 | Not Available | Positive | 2550592 - 2551260 | 25119.7 |
| duf1202 family protein | EPS91_12015 | Not Available | Negative | 2552001 - 2553008 | 38444.4 |
| l-asparaginase 2 | EPS91_12020 | Not Available | Negative | 2553125 - 2554171 | 36851.7 |
| duf2884 family protein | EPS91_12025 | Not Available | Negative | 2554347 - 2555066 | 26457.8 |
| duf469 domain-containing protein | EPS91_12030 | Not Available | Negative | 2555303 - 2555629 | 12823.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EPS91_12035 | Not Available | Negative | 2555629 - 2556348 | 27266.8 |
| a/g-specific adenine glycosylase | EPS91_12040 | Not Available | Positive | 2556509 - 2557561 | 39183.2 |
| oxidative damage protection protein | EPS91_12045 | Not Available | Positive | 2557589 - 2557864 | 10953.2 |
Pathways
1081 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





