Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystine abc transporter permease | EPS91_11940 | Not Available | Negative | 2538331 - 2538999 | 24832.8 |
| d-cysteine desulfhydrase | EPS91_11945 | Not Available | Negative | 2539014 - 2540000 | 35199.5 |
| cystine abc transporter substrate-binding protein | EPS91_11950 | Not Available | Negative | 2540105 - 2540905 | 29040.8 |
| flagella biosynthesis regulatory protein fliz | EPS91_11955 | Not Available | Negative | 2540993 - 2541544 | 21542.8 |
| rna polymerase sigma factor flia | EPS91_11960 | Not Available | Negative | 2541590 - 2542309 | 27552.8 |
| flagellin flic | EPS91_11965 | Not Available | Negative | 2542629 - 2544377 | 59787.6 |
| flagellar export chaperone flis | EPS91_11975 | Not Available | Positive | 2546074 - 2546484 | 15020.1 |
| flagella biosynthesis regulatory protein flit | EPS91_11980 | Not Available | Positive | 2546484 - 2546849 | 13743.5 |
| alpha-amylase | EPS91_11985 | Not Available | Positive | 2546927 - 2548414 | 56628.3 |
| lipoprotein | EPS91_11990 | Not Available | Negative | 2548448 - 2548861 | 15032.2 |
Pathways
922 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





