Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2532335 - 2532421 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2532434 - 2532507 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2532562 - 2532637 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | EPS91_11905 | Not Available | Negative | 2532789 - 2533337 | 20701.7 |
| excinuclease abc subunit uvrc | EPS91_11910 | Not Available | Negative | 2533394 - 2535226 | 68206.0 |
| two-component system response regulator uvry | EPS91_11915 | Not Available | Negative | 2535223 - 2535879 | 23864.1 |
| hypothetical protein | EPS91_11920 | Not Available | Positive | 2536175 - 2536351 | 6795.52 |
| duf2594 family protein | EPS91_11925 | Not Available | Positive | 2536338 - 2536562 | 8239.04 |
| transcriptional regulator sdia | EPS91_11930 | Not Available | Negative | 2536630 - 2537352 | 28036.8 |
| l-cystine abc transporter atp-binding protein yecc | EPS91_11935 | Not Available | Negative | 2537582 - 2538334 | 27705.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





