Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate diphosphatase | EPS91_11685 | Not Available | Negative | 2491773 - 2492225 | 17244.5 |
| aspartate--trna ligase | EPS91_11690 | Not Available | Negative | 2492218 - 2493990 | 65856.3 |
| hydrolase | EPS91_11695 | Not Available | Positive | 2494300 - 2494866 | 20480.4 |
| duf72 domain-containing protein | EPS91_11700 | Not Available | Positive | 2494863 - 2495681 | 31533.9 |
| hypothetical protein | EPS91_11705 | Not Available | Positive | 2495734 - 2496129 | 15227.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | EPS91_11710 | Not Available | Positive | 2496170 - 2496913 | 27792.3 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | EPS91_11715 | Not Available | Positive | 2496910 - 2497881 | 37007.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | EPS91_11720 | Not Available | Negative | 2498046 - 2500475 | 88933.9 |
| cytochrome c | EPS91_11725 | Not Available | Negative | 2500500 - 2501600 | 40263.6 |
| copper homeostasis protein cutc | EPS91_11730 | Not Available | Negative | 2501988 - 2502734 | 26698.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





