Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-valine transporter subunit ygah | EPS91_11325 | Not Available | Negative | 2429897 - 2430232 | 12070.3 |
| branched-chain amino acid abc transporter permease | EPS91_11330 | Not Available | Negative | 2430222 - 2430959 | 26095.1 |
| mfs transporter | EPS91_11335 | Not Available | Negative | 2431083 - 2432267 | 41624.9 |
| proline/glycine betaine abc transporter substrate-binding protein prox | EPS91_11340 | Not Available | Negative | 2432459 - 2433451 | 35952.3 |
| proline/glycine betaine abc transporter permease prow | EPS91_11345 | Not Available | Negative | 2433509 - 2434573 | 37592.0 |
| proline/glycine betaine abc transporter atp-binding protein prov | EPS91_11350 | Not Available | Negative | 2434566 - 2435768 | 44135.5 |
| hypothetical protein | EPS91_11355 | Not Available | Negative | 2435758 - 2436006 | 9386.39 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | EPS91_11360 | Not Available | Negative | 2436124 - 2437083 | 36469.0 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | EPS91_11365 | Not Available | Negative | 2437093 - 2439237 | 80510.5 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | EPS91_11370 | Not Available | Negative | 2439210 - 2439620 | 15341.3 |
Pathways
301 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





