Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 2422512 - 2422588 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2422599 - 2422675 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2422738 - 2422814 | Not Available |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EPS91_11290 | Not Available | Positive | 2423073 - 2423639 | 20800.1 |
| deda family protein | EPS91_11295 | Not Available | Positive | 2423636 - 2424064 | 15590.6 |
| glutamate--cysteine ligase | EPS91_11300 | Not Available | Positive | 2424137 - 2425693 | 58256.5 |
| s-ribosylhomocysteine lyase | EPS91_11305 | Not Available | Positive | 2425843 - 2426358 | 19444.4 |
| multidrug efflux mfs transporter permease subunit emrb | EPS91_11310 | Not Available | Negative | 2426422 - 2427960 | 55609.6 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | EPS91_11315 | Not Available | Negative | 2427977 - 2429149 | 42724.5 |
| multidrug efflux transporter emrab transcriptional repressor emrr | EPS91_11320 | Not Available | Negative | 2429276 - 2429806 | 20564.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





