Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | EPS91_10585 | Not Available | Positive | 2281517 - 2282443 | 34635.1 |
| osmc family peroxiredoxin | EPS91_10590 | Not Available | Negative | 2282499 - 2282930 | 15089.0 |
| biofilm-dependent modulation protein | EPS91_10595 | Not Available | Positive | 2283275 - 2283490 | 7988.24 |
| stationary-phase-induced ribosome-associated protein | EPS91_10600 | Not Available | Positive | 2283592 - 2283729 | 5096.13 |
| nad-dependent malic enzyme | EPS91_10605 | Not Available | Positive | 2283886 - 2285583 | 63206.0 |
| killer protein | EPS91_10615 | Not Available | Positive | 2286914 - 2287192 | 10521.7 |
| addiction module antidote protein, higa family | EPS91_10620 | Not Available | Positive | 2287192 - 2287476 | 10401.7 |
| formate dehydrogenase cytochrome b556 subunit | EPS91_10625 | Not Available | Negative | 2287677 - 2288330 | 25351.9 |
| formate dehydrogenase subunit beta | EPS91_10630 | Not Available | Negative | 2288323 - 2289207 | 32281.5 |
| formate dehydrogenase-n subunit alpha | EPS91_10635 | Not Available | Negative | 2289220 - 2292267 | 112765.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





