Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | EPS91_10365 | Not Available | Negative | 2230286 - 2231299 | 36338.1 |
| 4-phosphoerythronate dehydrogenase pdxb | EPS91_10370 | Not Available | Negative | 2231365 - 2232501 | 41359.0 |
| flagella biosynthesis regulator flk | EPS91_10375 | Not Available | Positive | 2232600 - 2233595 | 36626.4 |
| mfs transporter | EPS91_10380 | Not Available | Negative | 2233592 - 2234770 | 40506.8 |
| beta-ketoacyl-acp synthase i | EPS91_10385 | Not Available | Negative | 2235035 - 2236255 | 42615.9 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EPS91_10390 | Not Available | Positive | 2236414 - 2238420 | 74471.4 |
| yfcl family protein | EPS91_10395 | Not Available | Negative | 2238476 - 2238754 | 10023.6 |
| elongation factor p hydroxylase | EPS91_10400 | Not Available | Negative | 2238788 - 2239336 | 21102.5 |
| hypothetical protein | EPS91_10405 | Not Available | Negative | 2239336 - 2240145 | 28645.2 |
| penicillin-insensitive murein endopeptidase | EPS91_10410 | Not Available | Negative | 2240145 - 2240969 | 30227.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





