Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response protein elab | EPS91_10110 | Not Available | Negative | 2176423 - 2176728 | 11306.3 |
| gnat family n-acetyltransferase | EPS91_10115 | Not Available | Negative | 2176776 - 2177228 | 17200.3 |
| ribonuclease bn | EPS91_10120 | Not Available | Positive | 2177293 - 2178210 | 32922.6 |
| m28 family peptidase | EPS91_10130 | Not Available | Positive | 2180000 - 2180971 | 35851.5 |
| duf1877 family protein | EPS91_10135 | Not Available | Positive | 2181074 - 2181577 | 18972.8 |
| nadh-quinone oxidoreductase subunit nuon | EPS91_10140 | Not Available | Negative | 2181644 - 2183101 | 52019.2 |
| nadh-quinone oxidoreductase subunit m | EPS91_10145 | Not Available | Negative | 2183108 - 2184637 | 56527.9 |
| nadh-quinone oxidoreductase subunit l | EPS91_10150 | Not Available | Negative | 2184803 - 2186644 | 66412.1 |
| nadh-quinone oxidoreductase subunit nuok | EPS91_10155 | Not Available | Negative | 2186641 - 2186943 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | EPS91_10160 | Not Available | Negative | 2186940 - 2187494 | 19875.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





