Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity tryptophan permease tnab | EPS91_09220 | Not Available | Positive | 1993119 - 1994366 | 45227.3 |
| multidrug efflux mfs transporter mdtl | EPS91_09225 | Not Available | Positive | 1994499 - 1995674 | 41519.2 |
| hth-type transcriptional regulator yidz | EPS91_09230 | Not Available | Positive | 1995649 - 1996608 | 36919.9 |
| hypothetical protein | EPS91_09235 | Not Available | Positive | 1996765 - 1997514 | 27654.2 |
| nad(p)h-dependent chromate oxidoreductase yief | EPS91_09240 | Not Available | Positive | 1997536 - 1998102 | 20376.8 |
| ncs2 family permease | EPS91_09245 | Not Available | Negative | 1998155 - 1999492 | 46801.6 |
| 6-phosphogluconate phosphatase | EPS91_09250 | Not Available | Positive | 1999659 - 2000324 | 24882.0 |
| type iii effector | EPS91_09255 | Not Available | Negative | 2000461 - 2002869 | 93168.8 |
| type iii effector protein | EPS91_09260 | Not Available | Positive | 2003170 - 2004357 | 46097.9 |
| type iii effector protein | EPS91_09265 | Not Available | Negative | 2004827 - 2006773 | 76016.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





