Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EPS91_09120 | Not Available | Negative | 1973421 - 1974713 | 47093.5 |
| galactonate dehydratase | EPS91_09125 | Not Available | Negative | 1974833 - 1975981 | 42555.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EPS91_09130 | Not Available | Negative | 1975978 - 1976595 | 21372.8 |
| 2-dehydro-3-deoxygalactonokinase | EPS91_09135 | Not Available | Negative | 1976579 - 1977457 | 31430.4 |
| fadr family transcriptional regulator | EPS91_09140 | Not Available | Negative | 1977454 - 1978143 | 26081.1 |
| hypothetical protein | EPS91_09145 | Not Available | Positive | 1978420 - 1979076 | 23922.5 |
| sugar-phosphatase | EPS91_09150 | Not Available | Negative | 1979120 - 1979932 | 29708.8 |
| duf937 domain-containing protein | EPS91_09155 | Not Available | Negative | 1980047 - 1980454 | 14129.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EPS91_09160 | Not Available | Negative | 1980589 - 1983003 | 90012.1 |
| dna replication/repair protein recf | EPS91_09165 | Not Available | Negative | 1983032 - 1984105 | 40516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





