Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | EPS91_08455 | Not Available | Negative | 1831634 - 1832665 | 38655.9 |
| lps assembly lipoprotein lpte | EPS91_08460 | Not Available | Negative | 1832665 - 1833246 | 21289.6 |
| leucine--trna ligase | EPS91_08465 | Not Available | Negative | 1833261 - 1835843 | 97226.0 |
| zinc ribbon-containing protein | EPS91_08470 | Not Available | Positive | 1836078 - 1836560 | 18798.2 |
| pyrimidine-specific ribonucleoside hydrolase riha | EPS91_08475 | Not Available | Negative | 1836605 - 1837540 | 33885.9 |
| amino acid abc transporter atp-binding protein | EPS91_08480 | Not Available | Negative | 1837658 - 1838383 | 26662.7 |
| glutamate abc transporter permease | EPS91_08485 | Not Available | Negative | 1838383 - 1839057 | 24916.2 |
| amino acid abc transporter permease | EPS91_08490 | Not Available | Negative | 1839057 - 1839797 | 27456.2 |
| amino acid abc transporter substrate-binding protein | EPS91_08495 | Not Available | Negative | 1839967 - 1840875 | 33422.9 |
| rhomboid family intramembrane serine protease | EPS91_08500 | Not Available | Positive | 1841329 - 1843206 | 67534.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





