Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | EPS91_08290 | Not Available | Negative | 1804259 - 1805326 | 40277.4 |
| histidinol-phosphate transaminase | EPS91_08295 | Not Available | Negative | 1805326 - 1806396 | 39362.3 |
| histidinol dehydrogenase | EPS91_08300 | Not Available | Negative | 1806393 - 1807697 | 46182.0 |
| atp phosphoribosyltransferase | EPS91_08305 | Not Available | Negative | 1807703 - 1808602 | 33368.8 |
| his operon leader peptide | EPS91_08310 | Not Available | Negative | 1808748 - 1808798 | 2081.43 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | EPS91_08320 | Not Available | Positive | 1809081 - 1809332 | 9308.13 |
| txe/yoeb family addiction module toxin | EPS91_08325 | Not Available | Positive | 1809329 - 1809583 | 10202.1 |
| sdr family oxidoreductase | EPS91_08330 | Not Available | Positive | 1809666 - 1810490 | 29680.7 |
| lysr family transcriptional regulator | EPS91_08335 | Not Available | Positive | 1810536 - 1811465 | 34171.0 |
| membrane protein yoei | EPS91_08340 | Not Available | Positive | 1811680 - 1811742 | 2241.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





