Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epsg family protein | EPS91_08240 | Not Available | Positive | 1794383 - 1795387 | 39320.5 |
| glycosyltransferase family 2 protein | EPS91_08245 | Not Available | Positive | 1795389 - 1796348 | 36716.4 |
| glycosyltransferase family 1 protein | EPS91_08250 | Not Available | Positive | 1796358 - 1797422 | 41033.1 |
| nadp-dependent phosphogluconate dehydrogenase | EPS91_08255 | Not Available | Positive | 1797527 - 1798933 | 51485.1 |
| udp-glucose 6-dehydrogenase | EPS91_08260 | Not Available | Positive | 1799181 - 1800347 | 43615.2 |
| lps o-antigen chain length determinant protein wzzb | EPS91_08265 | Not Available | Positive | 1800493 - 1801473 | 36367.8 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | EPS91_08270 | Not Available | Negative | 1801569 - 1802180 | 22757.1 |
| imidazole glycerol phosphate synthase subunit hisf | EPS91_08275 | Not Available | Negative | 1802174 - 1802950 | 28457.0 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | EPS91_08280 | Not Available | Negative | 1802932 - 1803669 | 26017.2 |
| imidazole glycerol phosphate synthase subunit hish | EPS91_08285 | Not Available | Negative | 1803669 - 1804259 | 21654.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





