Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | EPS91_07840 | Not Available | Negative | 1705571 - 1707604 | 76258.9 |
| iron-sulfur cluster carrier protein apbc | EPS91_07845 | Not Available | Positive | 1707736 - 1708845 | 39940.4 |
| duf2574 family protein | EPS91_07850 | Not Available | Positive | 1709107 - 1709388 | 10152.2 |
| type 1 fimbrial protein | EPS91_07855 | Not Available | Positive | 1709684 - 1710226 | 19075.6 |
| fimbrial assembly protein | EPS91_07860 | Not Available | Positive | 1710307 - 1710981 | 24853.3 |
| fimbrial biogenesis outer membrane usher protein | EPS91_07865 | Not Available | Positive | 1710997 - 1713477 | 92247.0 |
| putative fimbrial-like adhesin protein | EPS91_07870 | Not Available | Positive | 1713493 - 1714527 | 36907.9 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | EPS91_07875 | Not Available | Negative | 1714609 - 1714947 | 12466.8 |
| nickel/cobalt efflux protein rcna | EPS91_07880 | Not Available | Negative | 1715166 - 1715981 | 30164.0 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | EPS91_07885 | Not Available | Positive | 1716102 - 1716374 | 10134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





