Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxygluconate transporter | EPS91_07320 | Not Available | Positive | 1599096 - 1600079 | 33743.4 |
| 6-n-hydroxylaminopurine resistance protein | EPS91_07325 | Not Available | Positive | 1600228 - 1600902 | 25332.1 |
| envelope stress sensor histidine kinase cpxa | EPS91_07330 | Not Available | Negative | 1601007 - 1602380 | 51627.3 |
| cation-efflux pump fief | EPS91_07545 | Not Available | Positive | 1636235 - 1637137 | 32915.2 |
| 6-phosphofructokinase | EPS91_07550 | Not Available | Positive | 1637318 - 1638280 | 34844.2 |
| sulfate abc transporter substrate-binding protein | EPS91_07555 | Not Available | Positive | 1638600 - 1639589 | 36661.2 |
| cdp-diacylglycerol diphosphatase | EPS91_07560 | Not Available | Positive | 1639696 - 1640451 | 28384.2 |
| triose-phosphate isomerase | EPS91_07565 | Not Available | Negative | 1640506 - 1641273 | 26973.3 |
| duf1454 family protein | EPS91_07570 | Not Available | Negative | 1641381 - 1641980 | 21796.2 |
| duf805 domain-containing protein | EPS91_07575 | Not Available | Positive | 1642081 - 1642521 | 16542.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





