Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_07210 | Not Available | Negative | 1575016 - 1575198 | 6776.24 |
| copg family transcriptional regulator | EPS91_07215 | Not Available | Positive | 1575453 - 1575671 | 8410.2 |
| hypothetical protein | EPS91_07220 | Not Available | Positive | 1575891 - 1576133 | 9314.01 |
| formate dehydrogenase accessory protein fdhe | EPS91_07225 | Not Available | Negative | 1576462 - 1577391 | 34720.6 |
| formate dehydrogenase cytochrome b556 subunit | EPS91_07230 | Not Available | Negative | 1577388 - 1578023 | 24607.7 |
| formate dehydrogenase subunit beta | EPS91_07235 | Not Available | Negative | 1578020 - 1578922 | 33111.1 |
| formate dehydrogenase-n subunit alpha | EPS91_07240 | Not Available | Negative | 1578935 - 1581985 | 112446.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EPS91_07245 | Not Available | Positive | 1582179 - 1583012 | 30468.7 |
| duf3829 domain-containing protein | EPS91_07250 | Not Available | Positive | 1583165 - 1584220 | 39262.4 |
| hth domain-containing protein | EPS91_07255 | Not Available | Negative | 1584270 - 1586018 | 66036.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





