Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis heme-transporting atpase ccma | EPS91_06995 | Not Available | Negative | 1516486 - 1517109 | 22929.4 |
| cytochrome c-type protein napc | EPS91_07000 | Not Available | Negative | 1517122 - 1517724 | 23101.8 |
| nitrate reductase cytochrome c-type subunit | EPS91_07005 | Not Available | Negative | 1517734 - 1518183 | 16297.4 |
| quinol dehydrogenase ferredoxin subunit naph | EPS91_07010 | Not Available | Negative | 1518180 - 1519043 | 31875.3 |
| ferredoxin-type protein napg | EPS91_07015 | Not Available | Negative | 1519030 - 1519725 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | EPS91_07020 | Not Available | Negative | 1519732 - 1522218 | 93092.0 |
| chaperone napd | EPS91_07025 | Not Available | Negative | 1522215 - 1522478 | 9469.03 |
| ferredoxin-type protein napf | EPS91_07030 | Not Available | Negative | 1522468 - 1522962 | 18061.4 |
| ecotin | EPS91_07035 | Not Available | Positive | 1523370 - 1523858 | 18180.0 |
| malate dehydrogenase (quinone) | EPS91_07040 | Not Available | Negative | 1524008 - 1525654 | 60247.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





