Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 1507050 - 1507126 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | EPS91_06950 | Not Available | Negative | 1507230 - 1509821 | 91099.9 |
| nitrate/nitrite response regulator protein narp | EPS91_06955 | Not Available | Positive | 1510141 - 1510788 | 23636.5 |
| cytochrome c-type biogenesis protein ccmh | EPS91_06960 | Not Available | Negative | 1510823 - 1511875 | 39163.4 |
| thiol:disulfide interchange protein dsbe | EPS91_06965 | Not Available | Negative | 1511872 - 1512429 | 20840.2 |
| heme lyase ccmf/nrfe family subunit | EPS91_06970 | Not Available | Negative | 1512426 - 1514369 | 71420.6 |
| cytochrome c maturation protein ccme | EPS91_06975 | Not Available | Negative | 1514366 - 1514845 | 17700.3 |
| heme exporter protein ccmd | EPS91_06980 | Not Available | Negative | 1514842 - 1515051 | 7745.59 |
| heme abc transporter permease | EPS91_06985 | Not Available | Negative | 1515048 - 1515785 | 27886.9 |
| heme exporter protein ccmb | EPS91_06990 | Not Available | Negative | 1515827 - 1516489 | 23602.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





