Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EPS91_06680 | Not Available | Negative | 1449291 - 1450649 | 48385.6 |
| lysr family transcriptional regulator | EPS91_06685 | Not Available | Positive | 1450776 - 1451684 | 33831.4 |
| hypothetical protein | EPS91_06690 | Not Available | Positive | 1451815 - 1452213 | 14579.6 |
| cidb/lrgb family autolysis modulator | EPS91_06695 | Not Available | Positive | 1452210 - 1452905 | 24471.1 |
| cytidine deaminase | EPS91_06700 | Not Available | Positive | 1453035 - 1453919 | 31568.6 |
| outer membrane permeability protein sana | EPS91_06705 | Not Available | Positive | 1454069 - 1454788 | 27288.5 |
| duf2542 family protein | EPS91_06710 | Not Available | Positive | 1454791 - 1455030 | 9264.61 |
| nad(p)-dependent oxidoreductase | EPS91_06715 | Not Available | Positive | 1455224 - 1456462 | 44386.1 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | EPS91_06720 | Not Available | Positive | 1456456 - 1457691 | 45024.3 |
| galactoside abc transporter permease | EPS91_06725 | Not Available | Negative | 1457762 - 1458772 | 35552.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





