Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein subunit fima | EPS91_06410 | Not Available | Negative | 1373545 - 1374087 | 18475.5 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EPS91_06415 | Not Available | Positive | 1374559 - 1375425 | 30987.6 |
| ribosome-associated protein ybcj | EPS91_06420 | Not Available | Positive | 1375427 - 1375639 | 7389.95 |
| metal-dependent hydrolase | EPS91_06425 | Not Available | Positive | 1375747 - 1376268 | 19465.5 |
| cysteine--trna ligase | EPS91_06430 | Not Available | Negative | 1376304 - 1377689 | 52186.9 |
| peptidylprolyl isomerase b | EPS91_06435 | Not Available | Positive | 1377863 - 1378357 | 18184.5 |
| udp-2,3-diacylglucosamine diphosphatase | EPS91_06440 | Not Available | Positive | 1378360 - 1379082 | 26881.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EPS91_06445 | Not Available | Positive | 1379200 - 1379709 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EPS91_06450 | Not Available | Positive | 1379706 - 1380773 | 39471.4 |
| carbamate kinase | EPS91_06455 | Not Available | Negative | 1381006 - 1381899 | 31722.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





