Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage adsorption protein nrfb | EPS91_06360 | Not Available | Positive | 1360643 - 1362655 | 77124.5 |
| phage receptor | EPS91_06365 | Not Available | Positive | 1362642 - 1365614 | 111456.0 |
| duf4434 family protein | EPS91_06370 | Not Available | Positive | 1365615 - 1366505 | 33046.5 |
| arac family transcriptional regulator | EPS91_06375 | Not Available | Positive | 1366688 - 1367449 | 29006.5 |
| Trna-arg | Not Available | Not Available | Positive | 1367495 - 1367571 | Not Available |
| fimbriae biosynthesis transcriptional regulator fimz | EPS91_06385 | Not Available | Positive | 1367813 - 1368445 | 23691.9 |
| fimbriae assembly protein | EPS91_06390 | Not Available | Negative | 1368448 - 1368963 | 18143.5 |
| type 1 fimbrin d-mannose specific adhesin fimh | EPS91_06395 | Not Available | Negative | 1368974 - 1369981 | 36692.1 |
| fimbrial biogenesis outer membrane usher protein | EPS91_06400 | Not Available | Negative | 1369994 - 1372603 | 95986.6 |
| molecular chaperone fimc | EPS91_06405 | Not Available | Negative | 1372634 - 1373326 | 25489.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





