Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase dpib | EPS91_06105 | Not Available | Negative | 1303262 - 1304920 | 61611.6 |
| [citrate (pro-3s)-lyase] ligase | EPS91_06110 | Not Available | Positive | 1305299 - 1306357 | 40119.6 |
| citrate lyase acyl carrier protein | EPS91_06115 | Not Available | Positive | 1306372 - 1306668 | 10689.9 |
| citrate (pro-3s)-lyase subunit beta | EPS91_06120 | Not Available | Positive | 1306665 - 1307573 | 33111.6 |
| citrate lyase subunit alpha | EPS91_06125 | Not Available | Positive | 1307584 - 1309116 | 55206.1 |
| citrate lyase holo-[acyl-carrier protein] synthase | EPS91_06130 | Not Available | Positive | 1309120 - 1309671 | 20256.5 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | EPS91_06135 | Not Available | Positive | 1309646 - 1310524 | 31639.3 |
| citrate/succinate antiporter citt | EPS91_06140 | Not Available | Positive | 1310575 - 1312038 | 53152.7 |
| ribonuclease i | EPS91_06145 | Not Available | Positive | 1312152 - 1312958 | 29595.0 |
| nucleoside diphosphate kinase regulator | EPS91_06150 | Not Available | Positive | 1313188 - 1313598 | 14928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





