Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | EPS91_05790 | Not Available | Negative | 1240597 - 1241661 | 38984.1 |
| phosphonate c-p lyase system protein phnh | EPS91_05795 | Not Available | Negative | 1241661 - 1242245 | 20985.5 |
| phosphonate c-p lyase system protein phng | EPS91_05800 | Not Available | Negative | 1242242 - 1242694 | 16568.7 |
| phosphonate metabolism transcriptional regulator phnf | EPS91_05805 | Not Available | Negative | 1242695 - 1243420 | 27616.0 |
| phosphonate abc transporter, permease protein phne | EPS91_05810 | Not Available | Negative | 1243441 - 1244220 | 28455.4 |
| phosphonate abc transporter substrate-binding protein | EPS91_05815 | Not Available | Negative | 1244285 - 1245301 | 37314.5 |
| phosphonate abc transporter atp-binding protein | EPS91_05820 | Not Available | Negative | 1245326 - 1246114 | 29480.5 |
| voc family metalloprotein yjdn | EPS91_05825 | Not Available | Negative | 1246247 - 1246690 | 16143.1 |
| phna family protein | EPS91_05830 | Not Available | Negative | 1246850 - 1247185 | 12345.7 |
| clamp-binding protein crfc | EPS91_05835 | Not Available | Positive | 1247587 - 1249815 | 84184.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





