Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | EPS91_05740 | Not Available | Negative | 1233145 - 1234035 | 32364.1 |
| bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpib | EPS91_05745 | Not Available | Positive | 1234394 - 1234843 | 16012.2 |
| protein yjdp | EPS91_05750 | Not Available | Positive | 1234912 - 1235241 | 13530.4 |
| phosphonate metabolism protein phnp | EPS91_05755 | Not Available | Negative | 1235276 - 1236034 | 27976.5 |
| aminoalkylphosphonate n-acetyltransferase | EPS91_05760 | Not Available | Negative | 1236036 - 1236470 | 16619.9 |
| ribose 1,5-bisphosphokinase | EPS91_05765 | Not Available | Negative | 1236457 - 1237014 | 20692.8 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | EPS91_05770 | Not Available | Negative | 1237014 - 1238150 | 42009.8 |
| phosphonate c-p lyase system protein phnl | EPS91_05775 | Not Available | Negative | 1238147 - 1238827 | 24790.1 |
| phosphonate c-p lyase system protein phnk | EPS91_05780 | Not Available | Negative | 1239004 - 1239762 | 27867.7 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | EPS91_05785 | Not Available | Negative | 1239759 - 1240604 | 31860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





