Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia-forming nitrite reductase cytochrome c552 subunit | EPS91_05640 | Not Available | Positive | 1209369 - 1210805 | 53705.7 |
| cytochrome c nitrite reductase pentaheme subunit | EPS91_05645 | Not Available | Positive | 1210851 - 1211417 | 20657.6 |
| cytochrome c nitrite reductase fe-s protein | EPS91_05650 | Not Available | Positive | 1211414 - 1212085 | 24571.8 |
| cytochrome c nitrite reductase subunit nrfd | EPS91_05655 | Not Available | Positive | 1212082 - 1213038 | 35041.4 |
| heme lyase ccmf/nrfe family subunit | EPS91_05660 | Not Available | Positive | 1213118 - 1214776 | 61537.4 |
| heme lyase nrfefg subunit nrff | EPS91_05665 | Not Available | Positive | 1214769 - 1215152 | 14546.0 |
| heme lyase nrfefg subunit nrfg | EPS91_05670 | Not Available | Positive | 1215149 - 1215745 | 22773.5 |
| glutamate/aspartate:proton symporter gltp | EPS91_05675 | Not Available | Positive | 1216087 - 1217400 | 47134.0 |
| sel1 repeat family protein | EPS91_05680 | Not Available | Negative | 1217479 - 1218168 | 25080.4 |
| formate dehydrogenase subunit alpha | EPS91_05685 | Not Available | Negative | 1218262 - 1220409 | 79286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





