Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptosyltransferase rfaq | EPS91_05330 | Not Available | Negative | 1145076 - 1146134 | 39448.8 |
| 3-deoxy-d-manno-octulosonic acid transferase | EPS91_05335 | Not Available | Positive | 1146547 - 1147824 | 47319.9 |
| pantetheine-phosphate adenylyltransferase | EPS91_05340 | Not Available | Positive | 1147832 - 1148311 | 17837.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | EPS91_05345 | Not Available | Negative | 1148350 - 1149159 | 30317.8 |
| 50s ribosomal protein l33 | EPS91_05350 | Not Available | Negative | 1149257 - 1149424 | 6371.94 |
| 50s ribosomal protein l28 | EPS91_05355 | Not Available | Negative | 1149445 - 1149681 | 9007.02 |
| jab domain-containing protein | EPS91_05360 | Not Available | Negative | 1149898 - 1150566 | 25259.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EPS91_05365 | Not Available | Positive | 1150738 - 1151958 | 43463.7 |
| dutp diphosphatase | EPS91_05370 | Not Available | Positive | 1151939 - 1152394 | 16157.4 |
| nucleoid occlusion factor slma | EPS91_05375 | Not Available | Positive | 1152501 - 1153097 | 22807.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





