Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose--lps heptosyltransferase rfaf | EPS91_05280 | Not Available | Positive | 1134901 - 1135947 | 39030.4 |
| lipopolysaccharide heptosyltransferase rfac | EPS91_05285 | Not Available | Positive | 1135951 - 1136931 | 36252.5 |
| ligase | EPS91_05290 | Not Available | Negative | 1137001 - 1138254 | 46804.3 |
| glycosyltransferase family 2 protein | EPS91_05295 | Not Available | Negative | 1138300 - 1139283 | 38731.3 |
| udp-galactose--(galactosyl) lps alpha1,2-galactosyltransferase | EPS91_05300 | Not Available | Negative | 1139365 - 1140393 | 39504.1 |
| lipopolysaccharide core heptose(ii) kinase rfay | EPS91_05305 | Not Available | Negative | 1140419 - 1141111 | 26948.7 |
| lipopolysaccharide 1,2-glucosyltransferase | EPS91_05310 | Not Available | Negative | 1141121 - 1142116 | 38492.9 |
| lipopolysaccharide 3-alpha-galactosyltransferase | EPS91_05315 | Not Available | Negative | 1142133 - 1143149 | 38853.9 |
| lipopolysaccharide core heptose(i) kinase rfap | EPS91_05320 | Not Available | Negative | 1143165 - 1143962 | 31133.2 |
| glycosyltransferase family 1 protein | EPS91_05325 | Not Available | Negative | 1143955 - 1145079 | 42586.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





