Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iia | EPS91_04695 | Not Available | Positive | 1005209 - 1005649 | 16506.9 |
| polysaccharide deacetylase family protein | EPS91_04700 | Not Available | Positive | 1005713 - 1006942 | 46340.9 |
| aspartate 1-decarboxylase | EPS91_04705 | Not Available | Negative | 1006946 - 1007326 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | EPS91_04710 | Not Available | Positive | 1007600 - 1008508 | 35117.4 |
| response regulator transcription factor | EPS91_04715 | Not Available | Negative | 1008826 - 1009428 | 22575.5 |
| lysr family transcriptional regulator | EPS91_04720 | Not Available | Positive | 1009948 - 1010847 | 33365.6 |
| inner membrane protein yhjd | EPS91_04725 | Not Available | Positive | 1010896 - 1011909 | 37961.6 |
| mfs transporter | EPS91_04730 | Not Available | Positive | 1012301 - 1013623 | 47210.9 |
| asma family protein | EPS91_04735 | Not Available | Negative | 1013802 - 1015862 | 74380.6 |
| cyclic-guanylate-specific phosphodiesterase | EPS91_04740 | Not Available | Negative | 1015932 - 1016699 | 29547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





