Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_04595 | Not Available | Positive | 981311 - 981550 | 9105.1 |
| bacteriocin immunity protein | EPS91_04600 | Not Available | Positive | 981551 - 981841 | 11482.5 |
| hnh endonuclease | EPS91_04605 | Not Available | Positive | 982008 - 982196 | 7110.37 |
| bacteriocin immunity protein | EPS91_04610 | Not Available | Positive | 982250 - 982540 | 11367.7 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | EPS91_04615 | Not Available | Positive | 982996 - 983760 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | EPS91_04620 | Not Available | Positive | 983921 - 986584 | 99700.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | EPS91_04625 | Not Available | Positive | 986599 - 988491 | 66103.7 |
| dihydrolipoyl dehydrogenase | EPS91_04630 | Not Available | Positive | 988699 - 990123 | 50691.4 |
| duf3300 domain-containing protein | EPS91_04635 | Not Available | Negative | 990194 - 992047 | 69439.6 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EPS91_04640 | Not Available | Positive | 992402 - 994999 | 93489.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





