Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp reductase | EPS91_04545 | Not Available | Positive | 970441 - 971484 | 37431.9 |
| type iv pilin biogenesis protein | EPS91_04550 | Not Available | Negative | 971519 - 972721 | 44255.0 |
| type ii secretion system protein gspe | EPS91_04555 | Not Available | Negative | 972711 - 974096 | 50695.5 |
| prepilin peptidase-dependent pilin | EPS91_04560 | Not Available | Negative | 974106 - 974546 | 15621.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | EPS91_04565 | Not Available | Negative | 974749 - 975642 | 32724.9 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EPS91_04570 | Not Available | Positive | 975730 - 976281 | 20520.1 |
| beta-lactamase regulator ampe | EPS91_04575 | Not Available | Positive | 976278 - 977132 | 32162.9 |
| aromatic amino acid transporter arop | EPS91_04580 | Not Available | Negative | 977175 - 978545 | 49608.0 |
| type vi secretion system tube protein hcp | EPS91_04585 | Not Available | Positive | 979075 - 980856 | 65744.7 |
| bacteriocin immunity protein | EPS91_04590 | Not Available | Positive | 980859 - 981143 | 11030.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





