Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | EPS91_04345 | Not Available | Positive | 928710 - 929474 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | EPS91_04350 | Not Available | Negative | 929556 - 930254 | 24980.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EPS91_04355 | Not Available | Negative | 930238 - 931848 | 59392.5 |
| thiamine abc transporter substrate binding subunit | EPS91_04360 | Not Available | Negative | 931824 - 932807 | 36195.2 |
| type iii effector | EPS91_04365 | Not Available | Positive | 933178 - 933747 | 21745.7 |
| hth-type transcriptional regulator sgrr | EPS91_04370 | Not Available | Negative | 933977 - 935635 | 64186.0 |
| glucose uptake inhibitor sgrt | EPS91_04375 | Not Available | Positive | 935724 - 935855 | 5382.47 |
| 3-isopropylmalate dehydratase small subunit | EPS91_04380 | Not Available | Negative | 935963 - 936568 | 22604.8 |
| 3-isopropylmalate dehydratase large subunit | EPS91_04385 | Not Available | Negative | 936579 - 937979 | 49884.7 |
| 3-isopropylmalate dehydrogenase | EPS91_04390 | Not Available | Negative | 937982 - 939073 | 39503.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





