Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine operon protein caie | EPS91_04195 | Not Available | Negative | 893082 - 893672 | 21176.6 |
| carnitinyl-coa dehydratase | EPS91_04200 | Not Available | Negative | 893678 - 894463 | 28191.8 |
| crotonobetaine/carnitine-coa ligase | EPS91_04205 | Not Available | Negative | 894572 - 896125 | 58519.3 |
| l-carnitine coa-transferase | EPS91_04210 | Not Available | Negative | 896199 - 897416 | 45055.3 |
| crotonobetainyl-coa dehydrogenase | EPS91_04215 | Not Available | Negative | 897545 - 898687 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | EPS91_04220 | Not Available | Negative | 898718 - 900232 | 56608.4 |
| electron transfer flavoprotein | EPS91_04225 | Not Available | Positive | 900705 - 901475 | 27131.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EPS91_04230 | Not Available | Positive | 901490 - 902431 | 33560.2 |
| fad-dependent oxidoreductase | EPS91_04235 | Not Available | Positive | 902482 - 903768 | 45732.6 |
| ferredoxin-like protein fixx | EPS91_04240 | Not Available | Positive | 903765 - 904052 | 10537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





