Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | EPS91_04095 | Not Available | Positive | 868550 - 869794 | 47211.5 |
| na+/h+ antiporter nhaa | EPS91_04100 | Not Available | Positive | 870046 - 871212 | 41328.2 |
| transcriptional activator nhar | EPS91_04105 | Not Available | Positive | 871272 - 872177 | 34258.3 |
| fimbrial family protein | EPS91_04110 | Not Available | Negative | 872215 - 873174 | 35982.4 |
| fimbrial biogenesis outer membrane usher protein | EPS91_04115 | Not Available | Negative | 873187 - 875637 | 92178.8 |
| molecular chaperone | EPS91_04120 | Not Available | Negative | 875650 - 876333 | 25424.0 |
| fimbrial protein | EPS91_04125 | Not Available | Negative | 876383 - 876916 | 19085.4 |
| pentapeptide repeat-containing protein | EPS91_04130 | Not Available | Negative | 877217 - 878638 | 55813.7 |
| 30s ribosomal protein s20 | EPS91_04135 | Not Available | Negative | 879122 - 879385 | 9684.94 |
| duf2575 domain-containing protein | EPS91_04140 | Not Available | Positive | 879488 - 879706 | 7890.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





