Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit f | EPS91_03740 | Not Available | Negative | 794051 - 795631 | 56679.5 |
| hydrogenase 4 membrane subunit | EPS91_03745 | Not Available | Negative | 795687 - 796286 | 21514.8 |
| hydrogenase 4 subunit d | EPS91_03750 | Not Available | Negative | 796298 - 797737 | 51810.7 |
| hydrogenase 3 membrane subunit | EPS91_03755 | Not Available | Negative | 797754 - 798701 | 34284.2 |
| hydrogenase 4 subunit b | EPS91_03760 | Not Available | Negative | 798712 - 800730 | 72679.5 |
| 4fe-4s dicluster domain-containing protein | EPS91_03765 | Not Available | Negative | 800730 - 801347 | 22191.5 |
| thioredoxin-dependent thiol peroxidase | EPS91_03770 | Not Available | Negative | 801600 - 802070 | 17634.9 |
| glycine cleavage system transcriptional repressor | EPS91_03775 | Not Available | Negative | 802070 - 802642 | 20769.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EPS91_03780 | Not Available | Positive | 802788 - 803666 | 31311.9 |
| outer membrane protein assembly factor bamc | EPS91_03785 | Not Available | Positive | 803683 - 804717 | 36860.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





