Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_03640 | Not Available | Negative | 771668 - 772207 | 20245.4 |
| glycine zipper 2tm domain-containing protein | EPS91_03645 | Not Available | Negative | 772223 - 772738 | 17574.9 |
| duf2633 family protein | EPS91_03650 | Not Available | Negative | 773052 - 773225 | 6856.35 |
| cyclic-guanylate-specific phosphodiesterase pdef | EPS91_03655 | Not Available | Positive | 773595 - 775838 | 85747.9 |
| exopolyphosphatase | EPS91_03660 | Not Available | Negative | 775877 - 777418 | 58166.5 |
| polyphosphate kinase 1 | EPS91_03665 | Not Available | Negative | 777423 - 779489 | 80436.1 |
| phosphoribosylglycinamide formyltransferase | EPS91_03670 | Not Available | Negative | 779661 - 780299 | 23283.7 |
| phosphoribosylformylglycinamidine cyclo-ligase | EPS91_03675 | Not Available | Negative | 780299 - 781336 | 36875.2 |
| uracil phosphoribosyltransferase | EPS91_03680 | Not Available | Positive | 781661 - 782287 | 22534.6 |
| uracil permease | EPS91_03685 | Not Available | Positive | 782373 - 783662 | 45049.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





