Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | EPS91_03375 | Not Available | Negative | 702006 - 702989 | 36803.9 |
| phenylalanyl--trna ligase operon leader peptide | EPS91_03380 | Not Available | Negative | 703128 - 703172 | 1762.13 |
| 50s ribosomal protein l20 | EPS91_03385 | Not Available | Negative | 703295 - 703651 | 13497.7 |
| 50s ribosomal protein l35 | EPS91_03390 | Not Available | Negative | 703705 - 703902 | 7289.38 |
| translation initiation factor if-3 | EPS91_03395 | Not Available | Negative | 703999 - 704541 | 20565.2 |
| threonine--trna ligase | EPS91_03400 | Not Available | Negative | 704545 - 706473 | 74008.4 |
| rok family protein | EPS91_03405 | Not Available | Negative | 707346 - 708539 | 44569.3 |
| sugar abc transporter substrate-binding protein | EPS91_03415 | Not Available | Positive | 712035 - 713018 | 35073.2 |
| sugar abc transporter atp-binding protein | EPS91_03420 | Not Available | Positive | 713041 - 714552 | 55097.9 |
| abc transporter permease | EPS91_03425 | Not Available | Positive | 714577 - 715575 | 34516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





