Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter ydik | EPS91_03220 | Not Available | Positive | 669001 - 670113 | 39833.7 |
| duf1870 family protein | EPS91_03230 | Not Available | Positive | 670542 - 670898 | 13872.5 |
| mfs transporter | EPS91_03235 | Not Available | Positive | 670998 - 672212 | 44599.7 |
| mfs transporter | EPS91_03240 | Not Available | Positive | 672439 - 673704 | 46078.0 |
| quinate/shikimate dehydrogenase | EPS91_03245 | Not Available | Positive | 673716 - 674582 | 31211.6 |
| type i 3-dehydroquinate dehydratase | EPS91_03250 | Not Available | Positive | 674613 - 675371 | 27450.2 |
| acetate coa-transferase ydif | EPS91_03255 | Not Available | Positive | 675517 - 677112 | 57537.6 |
| acyl-coa dehydrogenase | EPS91_03260 | Not Available | Positive | 677126 - 678277 | 43004.6 |
| arac family transcriptional regulator | EPS91_03265 | Not Available | Negative | 678320 - 679231 | 34868.2 |
| electron transfer flavoprotein | EPS91_03270 | Not Available | Positive | 679547 - 680311 | 27476.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





