Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin hipb | EPS94_02640 | Not Available | Positive | 537861 - 538127 | 10017.0 |
| type ii toxin-antitoxin system hipa family toxin | EPS94_02645 | Not Available | Positive | 538127 - 539449 | 49429.1 |
| regulator with hipb | EPS94_02650 | Not Available | Positive | 539489 - 539689 | 7750.52 |
| hypothetical protein | EPS94_02655 | Not Available | Negative | 539708 - 539965 | 9874.65 |
| sdr family oxidoreductase | EPS94_02660 | Not Available | Positive | 540075 - 540857 | 29143.8 |
| fimbrial protein | EPS94_02670 | Not Available | Positive | 541633 - 542196 | 19113.5 |
| fimbrial chaperone protein fimc | EPS94_02675 | Not Available | Positive | 542558 - 543268 | 26158.8 |
| fimbrial biogenesis outer membrane usher protein | EPS94_02680 | Not Available | Positive | 543310 - 545961 | 96586.3 |
| type 1 fimbrial protein | EPS94_02685 | Not Available | Positive | 545975 - 546505 | 18894.5 |
| type 1 fimbrial protein | EPS94_02690 | Not Available | Positive | 546518 - 547021 | 18189.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





