Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase ydif | EPS94_01865 | Not Available | Negative | 389053 - 390648 | 57550.7 |
| type i 3-dehydroquinate dehydratase | EPS94_01870 | Not Available | Negative | 390794 - 391552 | 27450.2 |
| quinate/shikimate dehydrogenase | EPS94_01875 | Not Available | Negative | 391583 - 392449 | 31229.6 |
| mfs transporter | EPS94_01880 | Not Available | Negative | 392461 - 393726 | 46078.0 |
| mfs transporter | EPS94_01885 | Not Available | Negative | 393953 - 395167 | 44597.7 |
| duf1870 family protein | EPS94_01890 | Not Available | Negative | 395267 - 395623 | 13847.5 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 395759 - 395866 | Not Available |
| ai-2e family transporter ydik | EPS94_01900 | Not Available | Negative | 396052 - 397164 | 39843.7 |
| fad-binding oxidoreductase | EPS94_01905 | Not Available | Positive | 397378 - 400434 | 113368.0 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | EPS94_01910 | Not Available | Positive | 400431 - 400841 | 14912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





