Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | EPS94_01165 | Not Available | Negative | 253471 - 254910 | 53240.4 |
| pqib family protein | EPS94_01170 | Not Available | Negative | 254990 - 257623 | 94879.0 |
| paraquat-inducible protein a | EPS94_01175 | Not Available | Negative | 257592 - 258875 | 48232.3 |
| gaf domain-containing protein | EPS94_01180 | Not Available | Positive | 259005 - 259502 | 18078.6 |
| rna chaperone proq | EPS94_01185 | Not Available | Positive | 259599 - 260297 | 25896.0 |
| carboxy terminal-processing peptidase | EPS94_01190 | Not Available | Positive | 260317 - 262365 | 76741.4 |
| protease htpx | EPS94_01195 | Not Available | Positive | 262557 - 263438 | 31959.3 |
| mfs transporter | EPS94_01200 | Not Available | Negative | 263484 - 264857 | 48107.7 |
| dna-binding transcriptional regulator kdgr | EPS94_01205 | Not Available | Positive | 265034 - 265825 | 30034.2 |
| hypothetical protein | EPS94_01210 | Not Available | Negative | 265969 - 266208 | 8514.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





