Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | EPS94_22185 | Not Available | Negative | 4534170 - 4535372 | 42790.0 |
| conjugal transfer protein trae | EPS94_22190 | Not Available | Negative | 4535474 - 4536295 | 31184.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | EPS94_22200 | Not Available | Negative | 4536768 - 4538129 | 48894.8 |
| prepilin peptidase | EPS94_22205 | Not Available | Negative | 4538147 - 4538773 | 23211.1 |
| lytic transglycosylase | EPS94_22210 | Not Available | Negative | 4538789 - 4539274 | 18413.4 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EPS94_22215 | Not Available | Negative | 4539319 - 4539855 | 19102.0 |
| type ii secretion protein f | EPS94_22220 | Not Available | Negative | 4539917 - 4541011 | 41169.8 |
| type ii secretion protein e | EPS94_22225 | Not Available | Negative | 4541013 - 4542521 | 55992.2 |
| type iv pilus biogenesis protein pilp | EPS94_22230 | Not Available | Negative | 4542624 - 4543082 | 16563.8 |
| pilus assembly protein | EPS94_22235 | Not Available | Negative | 4543072 - 4544367 | 47989.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





