Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inhibitor of g-type lysozyme | EPS94_19185 | Not Available | Negative | 3949097 - 3949498 | 14807.5 |
| hypothetical protein | EPS94_19190 | Not Available | Positive | 3949740 - 3950033 | 11247.7 |
| fumarylacetoacetate hydrolase family protein | EPS94_19195 | Not Available | Positive | 3950105 - 3950764 | 23682.4 |
| ycgn family cysteine cluster protein | EPS94_19200 | Not Available | Positive | 3950841 - 3951302 | 17853.2 |
| translesion error-prone dna polymerase v autoproteolytic subunit | EPS94_19210 | Not Available | Positive | 3952096 - 3952515 | 15052.2 |
| translesion error-prone dna polymerase v subunit umuc | EPS94_19215 | Not Available | Positive | 3952515 - 3953783 | 47508.1 |
| disulfide bond formation protein dsbb | EPS94_19220 | Not Available | Negative | 3953828 - 3954358 | 20129.3 |
| na(+)/h(+) antiporter nhab | EPS94_19225 | Not Available | Negative | 3954504 - 3956045 | 56706.9 |
| fatty acid metabolism transcriptional regulator fadr | EPS94_19230 | Not Available | Positive | 3956267 - 3956986 | 26970.2 |
| spovr family protein | EPS94_19235 | Not Available | Negative | 3957149 - 3958681 | 60803.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





