Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | EPS94_18605 | Not Available | Positive | 3833916 - 3834353 | 15951.0 |
| gnat family n-acetyltransferase | EPS94_18610 | Not Available | Positive | 3834350 - 3835339 | 37096.5 |
| alpha/beta hydrolase | EPS94_18615 | Not Available | Negative | 3835403 - 3836311 | 33622.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EPS94_18620 | Not Available | Positive | 3836540 - 3836851 | 12203.9 |
| helix-turn-helix domain-containing protein | EPS94_18625 | Not Available | Positive | 3836852 - 3837142 | 10847.1 |
| hypothetical protein | EPS94_18630 | Not Available | Positive | 3837227 - 3837439 | 8267.17 |
| hypothetical protein | EPS94_18635 | Not Available | Positive | 3837501 - 3837779 | 11130.1 |
| hypothetical protein | EPS94_18640 | Not Available | Positive | 3837818 - 3838000 | 7079.92 |
| copg family transcriptional regulator | EPS94_18645 | Not Available | Positive | 3838175 - 3838393 | 8478.33 |
| formate dehydrogenase accessory protein fdhe | EPS94_18650 | Not Available | Negative | 3838609 - 3839538 | 34720.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





