Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EPS94_18395 | Not Available | Negative | 3786483 - 3787409 | 37054.9 |
| relaxase | EPS94_18400 | Not Available | Negative | 3787399 - 3789018 | 60957.4 |
| duf1738 domain-containing protein | EPS94_18405 | Not Available | Negative | 3789321 - 3790232 | 34208.6 |
| hypothetical protein | EPS94_18410 | Not Available | Negative | 3790318 - 3790611 | 10608.6 |
| restriction endonuclease | EPS94_18415 | Not Available | Negative | 3790979 - 3791851 | 33190.7 |
| hypothetical protein | EPS94_18420 | Not Available | Negative | 3792096 - 3793919 | 69529.6 |
| histidine kinase | EPS94_18425 | Not Available | Negative | 3793912 - 3796881 | 113423.0 |
| dna cytosine methyltransferase | EPS94_18430 | Not Available | Negative | 3796975 - 3798171 | 45246.2 |
| hypothetical protein | EPS94_18435 | Not Available | Negative | 3798444 - 3798968 | 20275.6 |
| xre family transcriptional regulator | EPS94_18450 | Not Available | Positive | 3801532 - 3801828 | 11090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





