Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | EPS94_18295 | Not Available | Negative | 3763685 - 3764629 | 33786.8 |
| arginine deiminase | EPS94_18300 | Not Available | Negative | 3764640 - 3765860 | 45773.7 |
| yhch/yjgk/yial family protein | EPS94_18305 | Not Available | Positive | 3766538 - 3766990 | 16772.0 |
| ornithine carbamoyltransferase | EPS94_18310 | Not Available | Negative | 3767036 - 3768040 | 36753.2 |
| ribonuclease e inhibitor rrab | EPS94_18315 | Not Available | Positive | 3768202 - 3768618 | 15617.5 |
| gnat family n-acetyltransferase | EPS94_18320 | Not Available | Negative | 3768795 - 3769298 | 18473.4 |
| duf898 family protein | EPS94_18325 | Not Available | Positive | 3769491 - 3770678 | 44064.5 |
| valine--trna ligase | EPS94_18330 | Not Available | Negative | 3770725 - 3773580 | 108156.0 |
| dna polymerase iii subunit chi | EPS94_18335 | Not Available | Negative | 3773580 - 3774023 | 16574.5 |
| leucyl aminopeptidase | EPS94_18340 | Not Available | Negative | 3774281 - 3775792 | 54883.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





