Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EPS94_17445 | Not Available | Negative | 3598578 - 3598712 | 5297.45 |
| two-component system response regulator kdpe | EPS94_17450 | Not Available | Negative | 3598874 - 3599551 | 25377.7 |
| two-component system sensor histidine kinase kdbd | EPS94_17455 | Not Available | Negative | 3599548 - 3602232 | 98621.1 |
| k(+)-transporting atpase subunit c | EPS94_17460 | Not Available | Negative | 3602225 - 3602797 | 20409.4 |
| k(+)-transporting atpase subunit b | EPS94_17465 | Not Available | Negative | 3602806 - 3604854 | 72312.6 |
| potassium-transporting atpase subunit kdpa | EPS94_17470 | Not Available | Negative | 3604877 - 3606550 | 59055.5 |
| k(+)-transporting atpase subunit f | EPS94_17475 | Not Available | Negative | 3606550 - 3606639 | 3071.95 |
| duf2517 family protein | EPS94_17480 | Not Available | Positive | 3606952 - 3607158 | 8186.94 |
| duf1722 domain-containing protein | EPS94_17485 | Not Available | Positive | 3607259 - 3607768 | 20205.4 |
| deoxyribodipyrimidine photo-lyase | EPS94_17490 | Not Available | Positive | 3607765 - 3609183 | 53906.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





