Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 3567471 - 3567545 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3567569 - 3567653 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3567664 - 3567740 | Not Available |
| asparagine synthase b | EPS94_17305 | Not Available | Negative | 3568121 - 3569785 | 62662.3 |
| had-iia family hydrolase | EPS94_17310 | Not Available | Negative | 3570041 - 3570793 | 27164.6 |
| rok family transcriptional regulator | EPS94_17315 | Not Available | Negative | 3570841 - 3572061 | 44560.0 |
| n-acetylglucosamine-6-phosphate deacetylase | EPS94_17320 | Not Available | Negative | 3572070 - 3573218 | 40979.5 |
| glucosamine-6-phosphate deaminase | EPS94_17325 | Not Available | Negative | 3573278 - 3574078 | 29775.9 |
| pts n-acetyl glucosamine transporter subunit iiabc | EPS94_17330 | Not Available | Positive | 3574411 - 3576357 | 68333.9 |
| membrane transport protein | EPS94_17335 | Not Available | Negative | 3576446 - 3577726 | 44818.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





