Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 46_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1287439 bp
Thymine Count
1292544 bp
Guanine Count
1328816 bp
Cytosine Count
1304181 bp
Genome Length
5217173 bp
Protein-coding Genes
4820 genes
Non-Coding Genes
289 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [citrate (pro-3s)-lyase] ligase | EPS94_17090 | Not Available | Negative | 3529003 - 3530061 | 40079.5 |
| sensor histidine kinase dpib | EPS94_17095 | Not Available | Positive | 3530440 - 3532098 | 61694.8 |
| two-component response regulator | EPS94_17100 | Not Available | Positive | 3532067 - 3532747 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | EPS94_17105 | Not Available | Negative | 3532788 - 3534173 | 48415.3 |
| phospholipid:lipid a palmitoyltransferase | EPS94_17110 | Not Available | Positive | 3534760 - 3535320 | 21787.6 |
| cold shock-like protein cspe | EPS94_17115 | Not Available | Positive | 3535495 - 3535704 | 7463.84 |
| fluoride efflux transporter crcb | EPS94_17120 | Not Available | Negative | 3535758 - 3536141 | 13766.1 |
| deaminated glutathione amidase | EPS94_17125 | Not Available | Positive | 3536237 - 3537025 | 28650.0 |
| twin-arginine translocase subunit tate | EPS94_17130 | Not Available | Positive | 3537154 - 3537357 | 7024.71 |
| lipoyl synthase | EPS94_17135 | Not Available | Negative | 3537457 - 3538422 | 36073.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





